Royal Society Open Science
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Preprints posted in the last 90 days, ranked by how well they match Royal Society Open Science's content profile, based on 193 papers previously published here. The average preprint has a 0.14% match score for this journal, so anything above that is already an above-average fit.
Mugleston, J. D.; Huang, S.-M.; Dahl, C. D.
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Human pointing is often used to test whether dogs extract object-specific information from human communicative cues. However, above-chance responses in standard object-choice tasks do not by themselves distinguish between a referential interpretation, in which the gesture identifies a specific target, and an attentional interpretation, in which it primarily biases behaviour toward a broader spatial region. We addressed this issue using an asymmetric six-cup arrangement designed to separate coarse side guidance from exact cup localisation more clearly than a symmetric multi-cup design. Performance in domestic dogs was analysed using three measures: the probability of reaching the correct side, the probability of choosing the correct cup overall, and the probability of choosing the correct cup conditional on having first reached the correct side. The principal comparison involved three matched trial classes: the symmetric 3-vs-3 condition, 2-vs-4 trials with the baited cup on the 2-cup side, and 2-vs-4 trials with the baited cup on the 4-cup side. Descriptively, pointing trials exceeded matched no-point control trials more clearly for side selection than for overall cup choice. The clearest condition effect was observed at the level of side guidance. Dogs were most likely to reach the correct side when the baited cup was located on the 4-cup side of the unequal arrangement. Mixed-effects models confirmed a reliable group effect for side accuracy, whereas overall cup accuracy showed only a weaker and less robust condition effect, and within-side localisation revealed no reliable group difference once condition-specific chance baselines were taken into account. A complementary generative model comparison converged on the same conclusion: a referential-only model fit poorly, an attention-only model captured most of the grouped outcome structure, and a combined model yielded only a modest improvement. Dog point-following is therefore best understood as a layered process dominated by attentional guidance, with only limited additional target-specific localisation.
Howard, L.; Wagner, P. J.
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Paleobiologists commonly use genera as a proxy for species in biodiversity studies. However, a lingering concern is that patterns among genera might not always faithfully reflect patterns among species. To date, the concern has focused chiefly on measured patterns of richness over time and on implied origination and extinction rates. However, similar issues might arise for studies of morphological disparity. Moreover, there potentially are additional implications of disparity patterns among species versus those among genera concerning the range of observable anatomical characters and whether disparity within genera is comparable to disparity among genera. If clades have some relatively slowly changing characters that workers have used to denote different genera, then we would expect to see congeneric species to cluster in morphospace; however, if such characters are rare, then within-genus disparity might approach among-genus disparity. Here, we use genus-level and species-level disparity patterns among acanthoceratid ammonoids from the Late Cretaceous. In particular, we examine whether these different level imply different evolutionary dynamics over a major ecological event (Ocean Anoxic Event 2) and how disparity within genera (i.e., among congeneric species) compares to disparity among genera. We find genus-level disparity somewhat inflates early acanthoceratid disparity but implies similar patterns over the OAE2. We also find that within-genus disparity is slightly lower than among-genus, but not hugely so. The combined results suggest that acanthoceratoid shell anatomy does not really show "genus" level characters, even if congeneric species do tend to be more similar to each other than to species in other genera. Thus, this might provide more of a warning for other types of studies using anatomical data (e.g., phylogenetic studies) than for disparity studies. Non-technical SummaryMany paleobiologists use genera to examine scientific questions. This leads to questions over whether this broader approach misses important species-level patterns. This study uses acanthoceratid ammonoids from the Late Cretaceous to examine disparity patterns at both the genus-level and the species-level. We specifically examine the disparity at both levels of this group over a time of high stress for this group, Ocean Anoxic Event 2 (OAE2). Our results show that genus-level disparity slightly exaggerates early acanthoceratid disparity but lowers to a similar pattern to the species-level disparity during OAE2. Within-genus disparity is shown to be slightly lower than among-genus, but not enough to be startling. Together, these results indicate that while some species within the same genus tend to be more alike to each other than those in other genera, there isnt a set of true "genus" level characters. This outcome leads to a warning against using anatomical data in phylogenetic studies, but less so for disparity studies.
Hasik, A. Z.; Robinson, N.; Guinness, F.; Morris, S.; Morris, A.; Clutton-Brock, T.; Pemberton, J. M.
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Prolonged association between mothers and their offspring is common in ungulates, with the level of maternal investment likely to play a central role in shaping this trait. Here we examined patterns of association between mothers and offspring over time, the apparent benefits of association to offspring, and costs to mothers. We analyzed 40 years worth of census data from an individually-monitored, food-limited population of red deer (Cervus elaphus) on the Isle of Rum, Scotland. Starting from birth, female calves associated more frequently with their mothers than male calves in their first year. Calves also associated less with their mothers if the mother did not conceive a new calf. Association frequency decreased with mothers age and population density, and survival over the first year was not related to mother-calf association. Yearlings, now in their second year, were more often associated with their mothers if they were female, if there was no subsequent calf (or the subsequent calf died as a neonate), and if they were still being suckled. Increased association between mothers and yearlings was associated with increased survival to adulthood at 28 months, but suckling a yearling did not improve its probability of survival. For individuals that reached maturity, increased association in the yearling year was associated with slightly shorter adult life spans. The level of association between a calf and mother was not associated with the mothers immediate survival or fecundity. Our findings suggest that juveniles born to poor-condition mothers benefit from prolonged association through improved yearling survival.
Walton, A. E.; Versalovic, E.; Merner, A. R.; Lazaro-Munoz, G.; Bush, A.; Richardson, M.
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Patients who participate in intracranial neuroscience research make invaluable contributions to our understanding of the brain, accelerating the development of neurotechnological interventions. Engagement of patients as part of this research presents unique challenges, where study goals can be distant from immediate clinical applications and require specialized domain knowledge. Yet methods for meaningfully integrating patient communities as part of these research efforts is essential, as intracranial neuroscience guides the application of artificial intelligence for understanding and enhancing human cognition. In order to identify what patients consider meaningful research engagement we interviewed individuals who participated in a study during their Deep Brain Stimulation (DBS) surgery and attended a group event where they interacted with our research team. Analysis of semi-structured interviews identified four main themes: interest in science and the future of clinical care, contributing to science to improve lives, connecting with others, and accessibility considerations. Based on these insights, we propose strategies for transformational participation of patient communities in intracranial neuroscience research with respect to engagement objectives, communication and scope. This approach offers a foundation for sustaining relationships between scientists and communities rooted in trust and transparency, to ensure that impacts of neurotechnology on human health and cognition are aligned with patient needs as well as desired public values.
McCormick, K. M.; Amarasena, N.; Guzzo, G.
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Background: Periodontitis is defined by cumulative, irreversible tissue destruction, yet population-based measurement typically relies on cross-sectional indicators derived from retained teeth. Destruction that occurred earlier in life, particularly disease severe enough to result in tooth loss, is structurally excluded from these measures, potentially leading to systematic underestimation of lifetime periodontal burden. Objective: To develop and evaluate a measurement framework that estimates lifetime periodontal burden from cross-sectional data by explicitly incorporating informative tooth loss under etiological uncertainty. Methods: Data were drawn from 10,324 adults aged [≥]30 years participating in the 20090-2016 National Health and Nutrition Examination Survey (NHANES) who completed full-mouth periodontal examination and glycated hemoglobin (HbA1c) testing. Lifetime periodontal burden was estimated by combining observed clinical attachment loss in retained teeth with probabilistic contributions from missing teeth, using three alternative age-stratified attribution schedules derived from epidemiological studies of periodontal extraction. Performance was compared with conventional measures of periodontal severity and extent using distributional analyses, correlations with HbA1c, discrimination of diabetes status, and relative importance analysis. Age-adjusted models were treated as sensitivity analyses. Results: Estimated lifetime periodontal burden exhibited strong, monotonic age gradients across glycemic categories, in contrast to more attenuated patterns observed for severity and extent. Across attribution schedules, lifetime burden showed stronger correlations with HbA1c ({rho} = 0.30-0.32) than conventional measures. In multivariable models including all indices, lifetime burden retained an independent association with HbA1c, whereas severity and extent contributed little unique information. Discriminative performance for diabetes status was consistently higher for lifetime burden than for conventional measures and remained stable across attribution schedules. Conclusions: Lifetime periodontal burden can be estimated from cross-sectional data by explicitly modelling informative tooth loss rather than restricting measurement to retained teeth. Incorporating historical tissue loss under uncertainty yields a more coherent representation of cumulative periodontal destruction than snapshot-based measures and provides a methodological basis for life-course-oriented periodontal epidemiology.
Hanninger, E.-M. F. F.; Barratclough, A.; Betty, E. L.; Anderson, M. J.; Perrott, M. R.; Bowler, J.; Palmer, E. I.; Peters, K. J.; Stockin, K. A.
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We present the first radiographic ageing framework for common dolphins (Delphinus delphis), based on ossification and epiphyseal fusion patterns in the pectoral flipper, demonstrating higher reliability for chronological age estimation than currently available epigenetic approaches for this species. Using individuals of known dental age, we calibrated two modelling approaches to predict dental age from radiographic bone scores: 1) a univariate polynomial regression using a total bone score (sum of 16 scores across all assessed flipper bones), and 2) a multivariate canonical analysis of principal coordinates (CAP) incorporating 16 individual bone-score variables. Both approaches successfully predicted dental age from skeletal ossification patterns. For an age range of 0 to 24 years, polynomial regression demonstrated high predictive accuracy with median absolute errors (MAEs) of 1.25 years in females (Spearmans {rho} = 0.93, R{superscript 2} = 0.90) and 1.08 years in males ({rho} = 0.95, R{superscript 2} = 0.86). The CAP model yielded MAEs of 1.35 years in females ({rho} = 0.90, R{superscript 2} = 0.85) and 1.80 years in males ({rho} = 0.94, R{superscript 2} = 0.84). Notably, both radiographic bone ageing models achieved equal or lower median absolute errors and higher coefficients of determination than a recently developed epigenetic clock for common dolphins derived from the same population (MAE = 1.80, Pearsons correlation (r) = 0.91, R{superscript 2} = 0.82). When applying the bone ageing models to individuals of unknown dental age, both models produced age estimates consistent with expected life-history stages (foetus, neonate, juvenile, subadult, adult), although accuracy declined in dolphins above 20 years, likely as a consequence of subtle age-related variation in skeletal changes in this species. Radiographic ageing provides an accurate non-invasive tool for demographic assessment to support conservation management of common dolphins.
Pevsner, S. K.; Benson, R. B. J.; Kammerer, C. F.
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Gorgonopsian therapsids represent a transitional condition in the evolution of synapsid locomotion and postcranial structure. Most descriptions of gorgonopsians have focused on cranial material, however, limiting their usefulness for informing patterns of postcranial evolution on the mammal stem. While some recent work has begun to focus on postcrania, especially the pectoral girdle and forelimbs, comparatively little data are available on the pelvic girdle, hind limbs and tail. We report a new specimen of the late Permian gorgonopsian Aelurognathus tigriceps comprising a partial skull and well-preserved postcranial skeleton, including the near-complete series of dorsal vertebrae and ribs, complete pelvic girdle, hind limbs, feet, and a nearly complete tail. The tail is longer than any other published gorgonopsian. The new material presented here provides an opportunity to better establish broader patterns of morphology in the gorgonopsian postcranial skeleton.
McCormick, K. M.; Amarasena, N.; Guzzo, G.; Nath, S.; Jamieson, L.
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Aim: Cross-sectional summaries of periodontitis based on clinical attachment loss (CAL) are, by definition, conditioned on surviving teeth. Because the most severely affected teeth are more likely to have been lost, these measures may underestimate cumulative disease burden and show an artificial flattening (attenuation) of severity with age. We hypothesised that measures more sensitive to severe attachment loss would show greater attenuation at older ages than measures defined across a broader range of sites. Materials and Methods: Using nationally representative data from adults aged 30+ years in NHANES 2009-2014, we examined age-specific trajectories across multiple continuous measures of periodontal severity and assessed whether divergence between measures followed the pattern predicted under severity-dependent tooth loss. Results: The proportion of observable sites declined from 93% at ages 30-34 to 68% at 80+ years, establishing the structural basis for the divergence observed across severity measures. All severity measures showed nonlinear attenuation with age, with distortion increasing with severity threshold. Higher-threshold measures exhibited the greatest attenuation, while lower-threshold measures showed more stable trajectories. Conclusions: Cross-sectional summaries of periodontitis reflect disease among surviving teeth rather than cumulative damage across teeth originally at risk. Attenuation at older ages is consistent with depletion of the most severely affected teeth rather than biological slowing. Distortion varies by measure, with higher-threshold and mean-based indices most affected, whereas the CAL 3+ mm threshold provides a more stable basis for age comparisons.
Brondani, M.; Garbin, J. R.; Soheilipour, S.; Lee, V.
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Background: Higher education has been transformed by the rapid integration of generative artificial intelligence (GenAI) tools into academia. The objective of the present study was to examine how and for what purposes senior undergraduate dental students use GenAI tools in academic assignments. Methods: This cross-sectional study uses data from three written assignments submitted by two consecutive cohorts of graduating fourth-year dental students at the Faculty of Dentistry at the University of British Columbia, for a total of 120 students. The assignments focused on different subjects where students had to offer their views, including community water fluoridation. When using GenAI, students were asked to disclose whether and how such tools were used, and for what purpose. Descriptive statistics (e.g., means, frequencies, and proportions) were conducted via IBM SPSS Statistics (Version 27.0). Results: From the two cohort of students, 102 (85%) disclosed the use of GenAI tools in at least one assignment; of these, 69 (67.6%) reported using these tools in all three assignments. ChatGPT was by far the most frequently used GenAI tool, reported by 89 students (87.2%). Nine students (8.8%) did not specify which tool they had used. The majority of the students (91.2%, n = 93) reported using GenAI for proofreading or grammatical editing. About 9.8% of the students (n = 10) reported more substantive uses, such as relying on GenAI to generate in part or in full the assignment, and/or assessing the credibility of references. Conclusions: In our study, the use of GenAI tools was highly prevalent among senior undergraduate dental students for editorial purposes. A smaller but notable proportion of students engaged in more substantive uses that may carry academic and ethical risks. There is a need for structured AI literacy training and clear, dentistry-specific guidelines to promote responsible and transparent use while safeguarding critical thinking, academic integrity, and professional judgment in dental education.
Roberts, L. E.; Binfield, O. F.; Charles, J. P.; Comerford, E. J.; Bates, K. T.; Goswami, A.
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Domestic dogs (Canis familiaris) display more morphological variation than any other mammal. Cranial morphology has been extensively studied, as have the relationships with function, development, genetics, veterinary medicine, and breed welfare. Postcrania remain comparatively understudied, despite well-documented breed-specific predispositions to musculoskeletal disease. Here, we apply three-dimensional landmark-free morphometrics to quantify the shape of 743 elements from 213 dogs, including the scapula, humerus, radius, ulna, pelvic girdle, femur, tibia, and fibula. We assess integration among limb elements and investigate drivers of shape variation within and between breeds. Across most breeds, limb bone shape is strikingly similar. Dachshunds, however, exhibit distinct morphology across all elements and one to two orders of magnitude greater variation than any other breed. Despite this disparity, integration remains high between all element pairs. Remarkably, we find no significant relationship between bone shape and body mass, age, or pathology, but comparison with historic specimens reveals marked changes in dachshund long bone shape over the past [~]150 years. These extreme differences are not shared by other sampled chondrodysplastic breeds, underscoring the need to understand morphological diversity beyond simple categorisation. These findings provide a quantitative framework for linking postcranial morphology with function, disease risk, and evidence-based improvements to canine welfare.
Sondhi, Y.; Qian, R.; Currea, J. P.; Koushiar, I.; Degen, J.; Glass, D.; Stanley, E.; Sponberg, S.; Kitching, I. J.; Kawahara, A. Y.; Theobald, J. C.
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Superposition compound eyes improve sensitivity by pooling light from multiple facets and are widespread among nocturnal insects, including moths and beetles. Optical theory predicts that superposition eyes must be nearly spherical to form coherent images and therefore lack highly pronounced acute zones with high spatial resolution. To examine this, we imaged eyes of six hawkmoths (Sphingidae) spanning diurnal and nocturnal activity with high-resolution microcomputed tomography. Our automated pipeline created detailed eye maps quantifying morphological parameters. We measured local eye curvature (radial distance), interommatidial angle ({Delta}{varphi}), facet size and crystalline cone skewness (tilt of cone axes relative to the local surface normal). All species show more curvature in the dorso-ventral plane with flattening in the antero-posterior plane. However, their eyes still retain near-spherical curvature globally, with diurnal species showing greater distortion. For facet parameters, spatial acuity is generally highest (lowest {Delta}{varphi}) near the eye center and decreases gradually toward the periphery. However, overall variation in spatial acuity is low and these eyes lack distinct acute zones. Facet size gradually changes from center to periphery, increasing in some species and decreasing in the others. Cone skewness is present in all six species (0{degrees}-10{degrees}), but in two diurnal species of hummingbird hawkmoths it increases markedly in the posterior region (15{degrees}-30{degrees}) possibly compensating for regional eye flatness. This paper provides foundational data of ommatidial and eye shape measurements and advances our assumptions about how superposition eyes function.
Okabe, N.; Pauly, D.
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Life history strategies such as rapid growth and high population turnover rates observed in vertebrates have been thought to have emerged relatively late in evolution. However, very little direct evidence exists at the species level for early vertebrates. In this study, a large fossil collection of over 450 specimens of Protaspis spp, heterostracan agnathans from the Cottonwood Canyon Formation at Beartooth Butte, Wyoming, from the Early Devonian, was analyzed. Morphological observations, analysis of bone plate completeness, and length-frequency analyses using ELEFAN--commonly used in recent fish studies--were applied to reconstruct growth rates, cohort structure, and ontogenetic processes. Protaspis specimens exhibited a continuous growth series from juvenile to adult stages, and a clear cohort structure was identified from the length-frequency distributions. The ELEFAN analysis suggested a life-history characterized by rapid growth and a short life span, and these features remained consistent in subset analyses restricted by species or locality, confirming the robustness of the estimates. Furthermore, the integration of the dermal bone plates progressed during the late stages of ontogeny, revealing that the rapid growth during the juvenile stage preceded the completion of this defensive structure. Comparisons of their growth parameters with those of extant fishes show that Protaspis does not align with slow-growing, long-lived "living fossil" taxa, but instead clusters with small-bodied, fast-growing species. These findings suggest that life-history strategies involving rapid growth and high population turnover were already established in early jawless vertebrates, much earlier than previously assumed.
Henderson, A. S.; Moss, R.; Adekunle, A. I.; Ye, H.; O'Hara-Wild, M.; Eales, O.; Senior, K. L.; Tobin, R.; Windecker, S. M.; golding, N.; Robinson, E.; Strachan, J.; Hyndman, R. J.; Dawson, P.; McCaw, J.; McBryde, E.; Shearer, F. M.
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Temperate regions of the world, such as southern Australia, often experience increased health burden from respiratory pathogens during winter. The ability to forecast short-term trends in cases of these pathogens is of significant interest to public health. Across the 2024 southern hemisphere winter period, the Australia--Aotearoa Consortium for Epidemic Forecasting and Analytics (ACEFA) ran a pilot respiratory virus forecasting initiative in collaboration with the Victorian Department of Health. Each week from the 9th of May 2024 through to 12th September 2024, the consortium solicited 28-day forecasts of daily case incidence for influenza, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), and respiratory syncytial virus (RSV) from multiple research groups. Four component model forecasts were contributed by three different research groups, with a fourth group utilising the component forecasts to generate ensemble forecasts (making a total of six models, four component models and two ensembles). Here we statistically evaluated the performance of each forecast and a baseline model against the observed case data. The two ensemble models were found to be frequently the top performing models. All models performed worse than the baseline model around the epidemic peaks for each pathogen.
Kurayama, T.
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The preferred stride ratio (PSR), defined as the ratio of step length to cadence, is approximately invariant across a wide range of walking speeds in healthy adults but breaks down at slow speeds. The lower speed boundary at which this constancy is broken was estimated by Murakami and Otaka (2017) to be approximately 62 m min-1 ({approx} 1.03 m s-1) on the basis of unstandardised K-means cluster analysis applied to data from 21 healthy adults at five speed conditions. The present report re-examines this estimate using the digitised individual-level scatter of Fig. 1-A and the published group-level statistics of Table 1 of that study, applying three breakpoint estimators in parallel: (i) unstandardised K-means (replicating the original method), (ii) a Gaussian mean-and-variance changepoint estimator, and (iii) a piecewise-linear regression on PSR. Applied directly to the digitised scatter (n = 84 resolved markers from a total of 105; 44 of 44 slow-walk markers, 40 of 61 normal-walk markers), the unstandardised K-means estimator returned 62.0 m min-1, matching the originally reported value to the reported precision; the mean-and-variance changepoint estimator returned 55 m min-1; and the piecewise-linear estimator was numerically unstable on the raw heteroscedastic data. To quantify uncertainty, 5 000 Monte Carlo realisations of synthetic individual-level data were generated from a bivariate truncated-normal model conditioned on the published condition means and standard deviations and on the published within-cluster speed-PSR correlations. The Monte Carlo distributions gave median estimates of 61 m min-1 (95 % MC interval 55-67) for unstandardised K-means, 39 m min-1 (29-53) for the mean-and-variance changepoint estimator, and 35 m min-1 (19-49) for piecewise-linear regression. Under a log-normal sensitivity model the corresponding intervals were 60 [55, 66], 34 [20, 58], and 19 [5, 42] m min-1. The likelihood-based estimator placed the central tendency substantially below 62 m min-1, and its Monte Carlo intervals did not include the original boundary under either marginal-distribution model. An additional robust heteroscedastic segmented profile-likelihood analysis on log-PSR yielded lower Monte Carlo median breakpoints across all model specifications, although the full-variance intervals overlapped the original K-means boundary. The qualitative finding of Murakami and Otaka -- that PSR constancy breaks down at slow walking speeds -- is supported by the present reanalysis. The original 62 m min-1 boundary is reproduced under the unstandardised K-means estimator, where it reflects the location of the largest density gap in the published five-condition speed sampling rather than a formally estimated changepoint; estimators formally designed for changepoint detection localise the joint PSR mean-and-variance transition substantially below this value. O_FIG O_LINKSMALLFIG WIDTH=162 HEIGHT=200 SRC="FIGDIR/small/720900v2_fig1.gif" ALT="Figure 1"> View larger version (41K): org.highwire.dtl.DTLVardef@2bb53dorg.highwire.dtl.DTLVardef@187d9bborg.highwire.dtl.DTLVardef@1e7a6a0org.highwire.dtl.DTLVardef@16c587b_HPS_FORMAT_FIGEXP M_FIG O_FLOATNOFigure 1.C_FLOATNO Reproduction and likelihood-based extension of the boundary reported in Murakami and Otaka [5]. (A) Digitised individual-level scatter from Fig. 1-A of [5] (n = 84 resolved markers from a total of 105: 44 of 44 slow-walk markers and 40 of 61 normal-walk markers). The dashed vertical line marks the value 62.4 m min-1 as drawn in the original figure. (B) PSR variance amplification across the five speed conditions, expressed as Var(PSR)/Var(PSR)Preferred, on a logarithmic vertical axis. (C) Distributions of the breakpoint estimates over N = 5 000 Monte Carlo realisations under the bivariate truncated-normal model with cluster-specific within-cluster correlations: unstandardised K-means (median 61 m min-1), the Gaussian mean-and-variance changepoint estimator (median 39 m min-1), and piecewise-linear regression on PSR (median 35 m min-1). The dashed vertical line marks 62.4 m min-1. (D) Sensitivity of each estimator to the choice of marginal-distribution model (truncated normal vs. log-normal); error bars are 95 % Monte Carlo simulation intervals. (E) PSR mean {+/-} SD across the five speed conditions (Table 1 of [5], height-adjusted). C_FIG O_TBL View this table: org.highwire.dtl.DTLVardef@24fe39org.highwire.dtl.DTLVardef@ae8fdborg.highwire.dtl.DTLVardef@66a473org.highwire.dtl.DTLVardef@b6ad84org.highwire.dtl.DTLVardef@139bca7_HPS_FORMAT_FIGEXP M_TBL O_FLOATNOTable 1.C_FLOATNO O_TABLECAPTIONSource data reproduced from Murakami and Otaka [5], height-adjusted, n = 21 per condition. C_TABLECAPTION C_TBL
Pessina, L.; Bshary, R.
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Interactions between cleaner fish Labroides dimidiatus and client fish, from which cleaners remove ectoparasites and mucus, represent a textbook example of mutualism involving sophisticated strategic decision-making. However, cleaners must also face intraspecific social challenges within a size-based hierarchy, where the largest females may eventually change sex and become males with higher reproductive rates. Following 540 individuals over 11 months, we found that, contrary to expectations, slow-growing females spent more time cleaning and cheated more frequently, without causing more negative client responses than fast-growing females did. Instead, variation in growth was best explained by social factors: fast-growing individuals experienced reduced social control, while slow growers spent more time in proximity to dominant individuals. As there was no evidence that spawning activity affected growth patterns, it appears that fast growth as a viable strategy for becoming a male largely depends on the lack of control by dominants.
Cuaya, L. V.; Perez-Fraga, P.; Hernandez-Perez, R.; Pillwax, L.; Waldecker, I.; Reisinger, C.; Farago, T.; Winkler, S.; Huber, L.; Lamm, C.
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Dog (Canis lupus familiaris) vocal communication occurs across a wide range of social contexts, including dog-human social play, a common and dynamic interaction in which diverse vocal signals are expressed, particularly in young dogs. However, most available open datasets of dog vocalizations focus primarily on barks, leaving other sound types underrepresented. Here we present a bioacoustic dataset of dog-human social play sessions recorded under standardized laboratory conditions, comprising 30 play sessions involving 17 young dogs (6-24 months old) of different breeds playing with familiar humans. Raw audio recordings are accompanied by two layers of annotations covering the dog sounds produced during sessions. Video recordings of the sessions are provided for contextual reference, along with metadata describing each dog and the experimental sessions. Additionally, permutation-based classification analysis showed that annotated sound categories exhibit above-chance and generalizable acoustic differences across individuals. The dataset may support research on dog vocal communication and expand the range of sounds documented during positive dog-human social interactions.
Cadigan, S. C.; Smith, N. A.; Jones, T.; Wohlgemuth, M.
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Locating, tracking, and intercepting objects is a fundamental behavior for many organisms. For instance, predators must track and capture erratically moving prey for their survival. Using the echolocating bat as a model species, we investigate how short-term changes in target motion predictability affect longer-term motor plans when tracking a prey item. We used a paradigm where prey motion is under experimental control, and then applied computational methods to characterize how target motion predictability influences short- and long-term behavioral control. We find that target motion predictability during the tracking phase of insect capture influences both short-term changes in sonar call control, as well as longer-term behavioral control for transitioning between hunting phases. For changes in immediate behavioral control, bats produce more bursts of calls at a higher rate when tracking unpredictable moving prey, an indication that the bat is collecting more information about the targets motion for unpredictable than predictable trials. In terms of longer-term behavioral control, target motion unpredictability delays the transition from tracking to capture phase behaviors. We suggest that the bat does this to collect more information about target motion to time the transition from tracking to capture behaviors for hunting success. Additionally, we find the effects of target motion unpredictability are first seen as changes in the vocal motor plan and then the auditory motor plan (ear motion), hinting at a sequencing of motor changes that warrant further investigation. SummaryWhen presented with a more challenging hunting task, bats will increase their production of bursts of calls at a higher rate and delay their transition into capture behaviors.
Harbert, R. A.; Kovarovic, K.; Gruwier, B.
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Dental morphology and wear patterns provide insight into the dietary adaptations and ecological niches of living and extinct herbivores. Traditional classification statistics such as Linear Discriminant Analysis (LDA) are limited by assumptions of linearity, normality, and homoscedasticity. This study quantifies mesowear, the shape of molar cusps resulting from occlusal wear, and evaluates the performance of non-linear machine learning models in predicting herbivore diets based on geometric morphometric (GMM) data from adult mandibular second molars (M2) in bovids. We applied Generalized Procrustes Analysis and Principal Component Analysis (PCA) to digitized occlusal shape coordinates from 132 M2 specimens across 64 species. Using the resulting principal component scores, we compared the classification accuracy of LDA with three non-linear models: Random Forest, K-Nearest Neighbors, and Gradient Boosting. While LDA achieved a cross-validated accuracy of just 31%, all non-linear models achieved 99% cross-validation accuracy and 90% test accuracy, demonstrating substantially improved performance. Misclassification analyses revealed that non-linear models more effectively captured complex shape differences, particularly among species with overlapping wear patterns. Our findings support the integration of machine learning with geometric morphometrics to quantify mesowear and improve dietary classification, providing a framework for robust paleoecological inference.
Mahfouz, M.; Alzaben, E.
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Background: Peak height velocity (PHV) is a critical indicator of pubertal growth timing and is widely used in orthodontics to determine optimal timing for growth modification interventions. Secular trends toward earlier maturation have been reported, but a quantitative synthesis of PHV age reduction across generations is lacking. Objective: To systematically review and quantitatively synthesize evidence for secular trends in age at PHV and to estimate the pooled mean difference in PHV age between historical and contemporary cohorts. Methods: A systematic search was conducted in PubMed and Google Scholar from January 1990 to December 2021. The Directory of Open Access Journals (DOAJ) was also searched but yielded no eligible studies due to the specificity of the search string. Studies were included if they reported age at PHV in two or more birth cohorts separated by at least 20 years, used objective methods to determine PHV (longitudinal growth data with curve fitting), and reported means with standard deviations or standard errors. Risk of bias was assessed using the Newcastle-Ottawa Scale. A random-effects quantitative synthesis (meta-analytic approach) was performed to calculate the pooled mean difference in PHV age between historical and contemporary cohorts. Between-study variance (tau-squared) was estimated using the restricted maximum likelihood (REML) method. Heterogeneity was assessed using I-squared statistics. Given the limited number of eligible studies, findings should be interpreted as preliminary. Results: Two high-quality longitudinal studies met inclusion criteria, comprising 171 participants from historical cohorts (1969-1973) and 71 participants from contemporary cohorts (1996-2000). The pooled mean difference in PHV age was -0.48 years (95% CI: -0.72 to -0.24, P < 0.001), indicating that contemporary children reach PHV approximately 0.5 years earlier than their historical counterparts. PHV velocity showed a pooled increase of 0.71 cm/year (95% CI: 0.48 to 0.94, P < 0.001). Heterogeneity was low (I-squared = 0% for both analyses). Both studies were rated as low risk of bias. These findings are based on a limited number of studies and should be interpreted as preliminary. Conclusions: This preliminary quantitative synthesis provides evidence of a secular decline in age at peak height velocity of approximately 0.5 years in contemporary children compared to historical cohorts, accompanied by an increase in growth velocity. These findings suggest that orthodontic growth modification strategies may need to be initiated earlier than traditionally recommended. However, given the limited evidence base, results should be interpreted with caution and require confirmation in large-scale longitudinal studies.
Jaeger, J. H.; Tarrant, D.; Richards, M. P.; Ulriksen, J.; Sarauw, T.; Kastholm, O. T.; Nielsen, J.
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Stable isotope analysis provides an important tool for reconstructing past livestock management practices and landscape use. However, isotopic data for sheep from Late Iron Age (AD 375/400-1050) Denmark remain limited. Here, we present bulk bone collagen {delta}{superscript 1}3C, {delta}{superscript 1}N, and {delta}3S isotope analyses of 27 sheep (Ovis aries) from six archaeological sites in Denmark, dated to the Germanic Iron Age (AD 375/400-750) and Viking Age (AD 750-1050). The analysed sheep exhibit a consistent pattern of enriched {delta}13C values relative to previously published isotopic datasets for Scandinavian livestock, while {delta}15N values display substantial inter-individual variability. Sulfur isotope values fall within moderate ranges consistent with mixed terrestrial and coastal environmental influences. The decoupling of {delta}13C enrichment from elevated {delta}15N values suggests that the observed carbon isotope signal does not reflect marine protein consumption but rather the incorporation of a 13C-enriched plant resource into sheep diets. We propose that eelgrass (Zostera sp.), either through direct grazing in coastal environments or supplementary foddering with harvested eelgrass, represents a plausible dietary source to explain this isotopic pattern. The results indicate that Late Iron Age sheep management strategies in Denmark incorporated coastal plant resources within flexible pastoral systems, potentially supporting intensified wool production associated with expanding textile economies. HighlightsO_LIStable isotope values of Late Iron Age sheep show some dietary marine input. C_LIO_LIEnriched {delta}13C values suggest eelgrass as supplementary fodder. C_LIO_LI{delta}34S values indicate adaptive grazing across coastal and inland landscapes. C_LI